{ "_id": "6ac629a9f511ae58c09a6f1d", "Package": "BioTooltipR", "Title": "Add Bio Tooltips to HTML Reports", "Version": "0.1.2.9000", "Authors@R": "person(\"Matthew J.\", \"Meier\", email = \"matthew.meier@hc-sc.gc.ca\", role = c(\"aut\", \"cre\"))", "Description": "Provides lightweight helpers for adding gene and chemical\ntooltips to 'R Markdown', 'Quarto', 'shiny', 'pkgdown', and\nother HTML outputs. The package emits small HTML spans with\nmodule-specific data attributes and attaches the browser-side\n'bio-tooltips' JavaScript and CSS assets through 'htmltools'.\nEntity lookup and rendering are handled in the browser by\n'bio-tooltips'; this package does not query biological\ndatabases from R during package checks.", "Language": "en-US", "License": "MIT + file LICENSE", "URL": "https://github.com/mattjmeier/BioTooltipR", "BugReports": "https://github.com/mattjmeier/BioTooltipR/issues", "Encoding": "UTF-8", "Roxygen": "list(markdown = TRUE)", "VignetteBuilder": "knitr", "Config/testthat/edition": "3", "Config/roxygen2/version": "8.1.0", "Repository": "https://mattjmeier.r-universe.dev", "Date/Publication": "2026-10-07 01:24:43 UTC", "RemoteUrl": "https://github.com/mattjmeier/biotooltipr", "RemoteRef": "HEAD", "RemoteSha": "97ba013672df8f50f5c0c8fe732d10e3edcb5c86", "NeedsCompilation": "no", "Packaged": { "Date": "2026-10-07 09:18:42 UTC", "User": "root" }, "Author": "Matthew J. Meier [aut, cre]", "Maintainer": "Matthew J. Meier ", "_user": "mattjmeier", "_type": "src", "_file": "BioTooltipR_0.1.2.9000.tar.gz", "_fileid": "https://r2.ropensci.org/add627edbc2fa9ca0ea92b04e4264788d9d5f40657cdc797401a9b31d778252b", "_filesize": 408931, "_sha256": "add627edbc2fa9ca0ea92b04e4264788d9d5f40657cdc797401a9b31d778252b", "_expires": "2027-01-15T11:14:46.000Z", "_created": "2026-10-07T09:18:42.000Z", "_published": "2026-10-07T11:14:48.933Z", "_buildurl": "https://github.com/r-universe/mattjmeier/actions/runs/37597263158", "_status": "success", "_host": "GitHub-Actions", "_jobs": [ { "job": 112720996792, "time": 102, "config": "linux-devel-x86_64", "r": "4.7.0", "check": "OK", "artifact": "11472452227" }, { "job": 112720996799, "time": 114, "config": "linux-release-x86_64", "r": "4.6.1", "check": "OK", "artifact": "11472377501" }, { "job": 112720996921, "time": 130, "config": "macos-oldrel-arm64", "r": "4.5.3", "check": "OK", "artifact": "11477714636" }, { "job": 112720996865, "time": 148, "config": "macos-release-arm64", "r": "4.6.1", "check": "OK", "artifact": "11478113448" }, { "job": 112716682876, "time": 219, "config": "source", "r": "4.6.1", "check": "OK", "artifact": "11472168472" }, { "job": 112720997001, "time": 113, "config": "wasm-release", "r": "4.6.0", "check": "OK", "artifact": "11472566902" }, { "job": 112720996843, "time": 71, "config": "windows-devel-x86_64", "r": "4.7.0", "check": "OK", "artifact": "11471924757" }, { "job": 112720996894, "time": 77, "config": "windows-oldrel-x86_64", "r": "4.5.3", "check": "OK", "artifact": "11471989738" }, { "job": 112720996988, "time": 63, "config": "windows-release-x86_64", "r": "4.6.1", "check": "OK", "artifact": "11472725194" } ], "_upstream": "https://github.com/mattjmeier/biotooltipr", "_commit": { "id": "97ba013672df8f50f5c0c8fe732d10e3edcb5c86", "author": "Matthew Meier ", "committer": "GitHub ", "message": "Update README with AI-assisted development section\n\nAdded section on AI-assisted development in README.", "time": 1791336283 }, "_maintainer": { "name": "Matthew J. Meier", "email": "matthew.meier@hc-sc.gc.ca", "login": "ehsrb-bsrse-admin", "description": "", "uuid": 154367715 }, "_distro": "resolute", "_registered": true, "_dependencies": [ { "package": "R", "version": ">= 4.1", "role": "Depends" }, { "package": "htmltools", "role": "Imports" }, { "package": "jsonlite", "role": "Imports" }, { "package": "knitr", "role": "Imports" }, { "package": "utils", "role": "Imports" }, { "package": "DT", "role": "Suggests" }, { "package": "htmlwidgets", "role": "Suggests" }, { "package": "plotly", "role": "Suggests" }, { "package": "rmarkdown", "role": "Suggests" }, { "package": "testthat", "version": ">= 3.0.0", "role": "Suggests" } ], "_owner": "mattjmeier", "_selfowned": true, "_usedby": 0, "_updates": [ { "week": "2026-25", "n": 17 }, { "week": "2026-26", "n": 12 }, { "week": "2026-33", "n": 18 }, { "week": "2026-34", "n": 10 }, { "week": "2026-39", "n": 15 }, { "week": "2026-41", "n": 1 } ], "_tags": [ { "name": "v0.1.1", "date": "2026-08-20" }, { "name": "v0.1.2", "date": "2026-09-23" } ], "_topics": [ "bioinformatics", "chemicals", "genes", "rmarkdown", "tooltip", "tooltip-library", "tooltips" ], "_stars": 1, "_contributors": [ { "user": "mattjmeier", "count": 75, "uuid": 14365280 } ], "_userbio": { "uuid": 14365280, "type": "user", "name": "Matthew Meier", "followers": 17, "description": "My research is focused on the use of genomics technologies in the protection of human health." }, "_downloads": { "count": 357, "source": "https://cranlogs.r-pkg.org/downloads/total/last-month/BioTooltipR" }, "_devurl": "https://github.com/mattjmeier/biotooltipr", "_searchresults": 0, "_rbuild": "4.6.1", "_assets": [ "extra/BioTooltipR.html", "extra/citation.cff", "extra/citation.html", "extra/citation.json", "extra/citation.txt", "extra/contents.json", "extra/manual.pdf", "extra/NEWS.html", "extra/NEWS.txt", "extra/readme.html", "extra/readme.md", "LICENSE" ], "_homeurl": "https://github.com/mattjmeier/biotooltipr", "_realowner": "mattjmeier", "_cranurl": true, "_releases": [ { "version": "0.1.0", "date": "2026-06-30" }, { "version": "0.1.1", "date": "2026-08-20" }, { "version": "0.1.2", "date": "2026-09-24" } ], "_exports": [ "auto_gene_tooltips", "bio_tooltip_span", "bio_tooltips_dependency", "bt_datatable", "bt_deg_table", "bt_kable", "bt_plotly_gene_hover", "chem_column", "chem_tt", "chemical_tooltip", "chemical_tt", "gene_column", "gene_tooltip", "gene_tt", "tooltip_column", "use_bio_tooltips" ], "_help": [ { "page": "auto_gene_tooltips", "title": "Automatically wrap selected gene symbols in rendered HTML", "topics": [ "auto_gene_tooltips" ] }, { "page": "bio_tooltip_span", "title": "Create a Bio Tooltip span", "topics": [ "bio_tooltip_span" ] }, { "page": "bio_tooltips_dependency", "title": "Bio Tooltips HTML dependency", "topics": [ "bio_tooltips_dependency" ] }, { "page": "bt_datatable", "title": "Render a DT table with Bio Tooltips support", "topics": [ "bt_datatable" ] }, { "page": "bt_deg_table", "title": "Render a simple differential-expression style table", "topics": [ "bt_deg_table" ] }, { "page": "bt_kable", "title": "Render a kable table with Bio Tooltips support", "topics": [ "bt_kable" ] }, { "page": "bt_plotly_gene_hover", "title": "Add Bio Tooltips gene hover behavior to a Plotly plot", "topics": [ "bt_plotly_gene_hover" ] }, { "page": "chem_column", "title": "Add chemical tooltip markup to a data-frame column", "topics": [ "chem_column" ] }, { "page": "chem_tt", "title": "Create chemical tooltip spans", "topics": [ "chemical_tooltip", "chemical_tt", "chem_tt" ] }, { "page": "gene_column", "title": "Add gene tooltip markup to a data-frame column", "topics": [ "gene_column" ] }, { "page": "gene_tt", "title": "Create gene tooltip spans", "topics": [ "gene_tooltip", "gene_tt" ] }, { "page": "tooltip_column", "title": "Add Bio Tooltip markup to a data-frame column", "topics": [ "tooltip_column" ] }, { "page": "use_bio_tooltips", "title": "Attach and initialize Bio Tooltips", "topics": [ "use_bio_tooltips" ] } ], "_readme": "https://github.com/mattjmeier/biotooltipr/raw/HEAD/README.md", "_rundeps": [ "base64enc", "digest", "evaluate", "fastmap", "highr", "htmltools", "jsonlite", "knitr", "rlang", "xfun", "yaml" ], "_vignettes": [ { "source": "BioTooltipR.Rmd", "filename": "BioTooltipR.html", "title": "Adding BioTooltipR to R Markdown reports", "engine": "knitr::rmarkdown", "headings": [ "Inline prose", "Tables", "Assets", "Volcano plot", "Experimental auto-linking" ], "created": "2026-06-19 12:56:24", "modified": "2026-09-23 23:02:05", "commits": 24 } ], "_score": 4.477121254719663, "_indexed": true, "_nocasepkg": "biotooltipr", "_universes": [ "mattjmeier", "ehsrb-bsrse-admin" ], "_binaries": [ { "r": "4.7.0", "os": "linux", "version": "0.1.2.9000", "date": "2026-10-07T09:27:09.000Z", "distro": "resolute", "commit": "97ba013672df8f50f5c0c8fe732d10e3edcb5c86", "fileid": "https://r2.ropensci.org/65fad9315151613a2967f6c6426491873b7dc7e34396b09192030385c7f8aa1a", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/mattjmeier/actions/runs/37597263158" }, { "r": "4.6.1", "os": "linux", "version": "0.1.2.9000", "date": "2026-10-07T09:27:16.000Z", "distro": "resolute", "commit": "97ba013672df8f50f5c0c8fe732d10e3edcb5c86", "fileid": "https://r2.ropensci.org/2ccd50e006e9bf73542ff87557ff42390edeff520f287ca5d3acec4d19bbd069", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/mattjmeier/actions/runs/37597263158" }, { "r": "4.5.3", "os": "mac", "version": "0.1.2.9000", "date": "2026-10-07T11:13:52.000Z", "commit": "97ba013672df8f50f5c0c8fe732d10e3edcb5c86", "fileid": "https://r2.ropensci.org/7ec5d452234c70e39e983aa08d6989465dcffadee9c87d6f80057183ba48fb47", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/mattjmeier/actions/runs/37597263158" }, { "r": "4.6.1", "os": "mac", "version": "0.1.2.9000", "date": "2026-10-07T11:08:22.000Z", "commit": "97ba013672df8f50f5c0c8fe732d10e3edcb5c86", "fileid": "https://r2.ropensci.org/f2ea9b986eb3aa56b34879d0257e4d53fd2fd53b3b0860f6517f1591bf3845a4", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/mattjmeier/actions/runs/37597263158" }, { "r": "4.6.0", "os": "wasm", "version": "0.1.2.9000", "date": "2026-10-07T09:27:29.000Z", "commit": "97ba013672df8f50f5c0c8fe732d10e3edcb5c86", "fileid": "https://r2.ropensci.org/2ca25262f2e38455aaab74ef88d00b5b22258e23df1df8bff59ce3753b008856", "status": "success", "buildurl": "https://github.com/r-universe/mattjmeier/actions/runs/37597263158" }, { "r": "4.7.0", "os": "win", "version": "0.1.2.9000", "date": "2026-10-07T09:20:38.000Z", "commit": "97ba013672df8f50f5c0c8fe732d10e3edcb5c86", "fileid": "https://r2.ropensci.org/44b719e3ab617683daeceeabf476921fd8a756eaf62e620b20872bc194a7a55b", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/mattjmeier/actions/runs/37597263158" }, { "r": "4.5.3", "os": "win", "version": "0.1.2.9000", "date": "2026-10-07T09:20:48.000Z", "commit": "97ba013672df8f50f5c0c8fe732d10e3edcb5c86", "fileid": "https://r2.ropensci.org/f0ff4549e1051b73dc380503743412e62d3e2690db956fa31a44bec6dad9e0b4", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/mattjmeier/actions/runs/37597263158" }, { "r": "4.6.1", "os": "win", "version": "0.1.2.9000", "date": "2026-10-07T09:20:43.000Z", "commit": "97ba013672df8f50f5c0c8fe732d10e3edcb5c86", "fileid": "https://r2.ropensci.org/411e304e265dd7260396e0c1cf9d8eebae68abcdd5f216b1896866167c0b83a5", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/mattjmeier/actions/runs/37597263158" } ] }